OESA-2022-1963

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Source
https://www.openeuler.org/en/security/security-bulletins/detail/?id=openEuler-SA-2022-1963
Import Source
https://repo.openeuler.org/security/data/osv/OESA-2022-1963.json
JSON Data
https://api.osv.dev/v1/vulns/OESA-2022-1963
Upstream
Published
2022-09-23T11:04:22Z
Modified
2025-09-03T06:17:09.783620Z
Summary
htslib security update
Details

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM, CRAM and VCF, used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. HTSlib implements a generalized BAM index, with file extension .csi ( coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

Security Fix(es):

HTSlib through 1.10.2 allows out-of-bounds write access in vcfparseformat (called from vcfparse and vcfread).(CVE-2020-36403)

Database specific 
{
    "severity": "High"
}
References

Affected packages

openEuler:20.03-LTS-SP3 / htslib

Package

Name
htslib
Purl
pkg:rpm/openEuler/htslib&distro=openEuler-20.03-LTS-SP3

Affected ranges

Type
ECOSYSTEM
Events
Introduced
0Unknown introduced version / All previous versions are affected
Fixed
1.11-1.oe1

Ecosystem specific 

{
    "x86_64": [
        "htslib-devel-1.11-1.oe1.x86_64.rpm",
        "htslib-debuginfo-1.11-1.oe1.x86_64.rpm",
        "htslib-1.11-1.oe1.x86_64.rpm",
        "htslib-tools-1.11-1.oe1.x86_64.rpm",
        "htslib-debugsource-1.11-1.oe1.x86_64.rpm"
    ],
    "aarch64": [
        "htslib-devel-1.11-1.oe1.aarch64.rpm",
        "htslib-debugsource-1.11-1.oe1.aarch64.rpm",
        "htslib-1.11-1.oe1.aarch64.rpm",
        "htslib-debuginfo-1.11-1.oe1.aarch64.rpm",
        "htslib-tools-1.11-1.oe1.aarch64.rpm"
    ],
    "src": [
        "htslib-1.11-1.oe1.src.rpm"
    ]
}